Serveur d'exploration sur le peuplier - Exploration (Accueil)

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Sequence Analysis, Protein (methods) < Sequence Analysis, RNA (MeSH) < Sequence Analysis, RNA (methods)  Facettes :

List of bibliographic references indexed by Sequence Analysis, RNA (MeSH)

Number of relevant bibliographic references: 45.
Ident.Authors (with country if any)Title
000337 (2020) Cailin Li [République populaire de Chine] ; Shaowei Qin [République populaire de Chine] ; Lianghong Bao [République populaire de Chine] ; Zhongzhong Guo [République populaire de Chine] ; Lifeng Zhao [République populaire de Chine]Identification and functional prediction of circRNAs in Populus Euphratica Oliv. heteromorphic leaves.
000872 (2019) Yunpeng Cao [République populaire de Chine] ; Xiaoxu Li [République populaire de Chine] ; Lan Jiang [République populaire de Chine]Integrative Analysis of the Core Fruit Lignification Toolbox in Pear Reveals Targets for Fruit Quality Bioengineering.
000903 (2019) Wenjia Tian [République populaire de Chine] ; Youyou Ge [République populaire de Chine] ; Xiaoyu Liu [République populaire de Chine] ; Guiming Dou [République populaire de Chine] ; Yuchao Ma [République populaire de Chine]Identification and characterization of Populus microRNAs in response to plant growth-promoting endophytic Streptomyces sp. SSD49.
000913 (2019) Wolfram Georg Brenner [Allemagne] ; Malte Mader [Allemagne] ; Niels Andreas Müller [Allemagne] ; Hans Hoenicka [Allemagne] ; Hilke Schroeder [Allemagne] ; Ingo Zorn [Allemagne] ; Matthias Fladung [Allemagne] ; Birgit Kersten [Allemagne]High Level of Conservation of Mitochondrial RNA Editing Sites Among Four Populus Species.
000929 (2019) Jin-Gui Liu [République populaire de Chine] ; Xiao Han [République populaire de Chine] ; Tong Yang [République populaire de Chine] ; Wen-Hui Cui [République populaire de Chine] ; Ai-Min Wu [République populaire de Chine] ; Chun-Xiang Fu [République populaire de Chine] ; Bai-Chen Wang [République populaire de Chine] ; Li-Jun Liu [République populaire de Chine]Genome-wide transcriptional adaptation to salt stress in Populus.
000A43 (2019) Pei Sun [République populaire de Chine] ; Huixia Jia [République populaire de Chine] ; Yahong Zhang [République populaire de Chine] ; Jianbo Li [République populaire de Chine] ; Mengzhu Lu [République populaire de Chine] ; Jianjun Hu [République populaire de Chine]Deciphering Genetic Architecture of Adventitious Root and Related Shoot Traits in Populus Using QTL Mapping and RNA-Seq Data.
000C25 (2018) Pedro Seoane [Espagne] ; Marina Espigares [Espagne] ; Rosario Carmona [Espagne] ; Álvaro Polonio [Espagne] ; Julia Quintana [États-Unis] ; Enrico Cretazzo [Espagne] ; Josefina Bota [Espagne] ; Alejandro Pérez-García [Espagne] ; Juan De Dios Alché [Espagne] ; Luis G Mez [Espagne] ; M Gonzalo Claros [Espagne]TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms.
000E46 (2018) Erin D. Scully [États-Unis] ; Scott M. Geib [États-Unis] ; Charles J. Mason [États-Unis] ; John E. Carlson [États-Unis, Corée du Sud] ; Ming Tien [États-Unis] ; Han-Yi Chen [États-Unis] ; Scott Harding [États-Unis] ; Chung-Jui Tsai [États-Unis] ; Kelli Hoover [États-Unis]Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis).
001068 (2018) Odile Rogier [France] ; Aurélien Chateigner [France] ; Souhila Amanzougarene [France] ; Marie-Claude Lesage-Descauses [France] ; Sandrine Balzergue [France] ; Véronique Brunaud [France] ; José Caius [France] ; Ludivine Soubigou-Taconnat [France] ; Véronique Jorge [France] ; Vincent Segura [France]Accuracy of RNAseq based SNP discovery and genotyping in Populusnigra.
001090 (2018) Zhong Chen [République populaire de Chine] ; Pian Rao [République populaire de Chine] ; Xiaoyu Yang [République populaire de Chine] ; Xiaoxing Su [République populaire de Chine] ; Tianyun Zhao [République populaire de Chine] ; Kai Gao [République populaire de Chine] ; Xiong Yang [République populaire de Chine] ; Xinmin An [République populaire de Chine, États-Unis]A Global View of Transcriptome Dynamics During Male Floral Bud Development in Populus tomentosa.
001148 (2017) Rui Shi [États-Unis] ; Jack P. Wang [États-Unis, République populaire de Chine] ; Ying-Chung Lin [États-Unis, République populaire de Chine, Taïwan] ; Quanzi Li [République populaire de Chine] ; Ying-Hsuan Sun [Taïwan] ; Hao Chen [États-Unis] ; Ronald R. Sederoff [États-Unis] ; Vincent L. Chiang [États-Unis, République populaire de Chine]Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa.
001352 (2017) Daling Zhou [République populaire de Chine] ; Qingzhang Du [République populaire de Chine] ; Jinhui Chen [République populaire de Chine] ; Qingshi Wang [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine]Identification and allelic dissection uncover roles of lncRNAs in secondary growth of Populus tomentosa.
001396 (2017) Seong-Bum Park [Corée du Sud] ; Jong Youn Kim [Corée du Sud] ; Jung Yeon Han [Corée du Sud] ; Chang-Ho Ahn [Corée du Sud] ; Eung-Jun Park [Corée du Sud] ; Yong Eui Choi [Corée du Sud]Exploring genes involved in benzoic acid biosynthesis in the Populus davidiana transcriptome and their transcriptional activity upon methyl jasmonate treatment.
001466 (2017) Jingbo Jia [République populaire de Chine] ; Jing Zhou [République populaire de Chine] ; Wenguang Shi [République populaire de Chine] ; Xu Cao [République populaire de Chine] ; Jie Luo [République populaire de Chine] ; Andrea Polle [Allemagne] ; Zhi-Bin Luo [République populaire de Chine]Comparative transcriptomic analysis reveals the roles of overlapping heat-/drought-responsive genes in poplars exposed to high temperature and drought.
001619 (2016) Igor A. Yakovlev [Norvège] ; Elena Carneros [Norvège] ; Yeonkyeong Lee [Norvège] ; Jorunn E. Olsen [Norvège] ; Carl Gunnar Fossdal [Norvège]Transcriptional profiling of epigenetic regulators in somatic embryos during temperature induced formation of an epigenetic memory in Norway spruce.
001634 (2016) Mathilde Royer [France] ; David Cohen [France] ; Nathalie Aubry [France] ; Vera Vendramin [Italie] ; Simone Scalabrin [Italie] ; Federica Cattonaro [Italie] ; Marie-Béatrice Bogeat-Triboulot [France] ; Irène Hummel [France]The build-up of osmotic stress responses within the growing root apex using kinematics and RNA-sequencing.
001850 (2016) J J Wang [République populaire de Chine] ; X K Lu [République populaire de Chine] ; Z J Yin [République populaire de Chine] ; M. Mu [République populaire de Chine] ; X J Zhao [République populaire de Chine] ; D L Wang [République populaire de Chine] ; S. Wang [République populaire de Chine] ; W L Fan [République populaire de Chine] ; L X Guo [République populaire de Chine] ; W W Ye [République populaire de Chine] ; S X Yu [Oman]Genome-wide identification and expression analysis of CIPK genes in diploid cottons.
001A20 (2016) Yuichi Aoki [Japon] ; Yasunobu Okamura [Japon] ; Shu Tadaka [Japon] ; Kengo Kinoshita [Japon] ; Takeshi Obayashi [Japon]ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression.
001A87 (2015) Adam J. Foster [Canada] ; Gervais Pelletier [Canada] ; Philippe Tanguay [Canada] ; Armand Séguin [Canada]Transcriptome Analysis of Poplar during Leaf Spot Infection with Sphaerulina spp.
001A91 (2015) Jinhui Chen [République populaire de Chine] ; Beibei Chen [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine]Transcript profiling of Populus tomentosa genes in normal, tension, and opposite wood by RNA-seq.
001B20 (2015) Marçal Soler [France] ; Eduardo Leal Oliveira Camargo [France] ; Victor Carocha [France, Portugal] ; Hua Cassan-Wang [France] ; Hélène San Clemente [France] ; Bruno Savelli [France] ; Charles A. Hefer [Afrique du Sud] ; Jorge A Pinto Paiva [Portugal] ; Alexander A. Myburg [Afrique du Sud] ; Jacqueline Grima-Pettenati [France]The Eucalyptus grandis R2R3-MYB transcription factor family: evidence for woody growth-related evolution and function.
001B66 (2015) Andrea Ariani [Italie] ; Daniela Di Baccio [Italie] ; Stefania Romeo [Italie] ; Lara Lombardi [Italie] ; Andrea Andreucci [Italie] ; Alexander Lux [Slovaquie] ; David Stephen Horner [Italie] ; Luca Sebastiani [Italie]RNA sequencing of Populus x canadensis roots identifies key molecular mechanisms underlying physiological adaption to excess zinc.
001C84 (2015) Paul E. Abraham [États-Unis] ; Xiaojing Wang [États-Unis] ; Priya Ranjan [États-Unis] ; Intawat Nookaew [États-Unis] ; Bing Zhang [États-Unis] ; Gerald A. Tuskan [États-Unis] ; Robert L. Hettich [États-Unis]Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural Protein Sequence Variants of Populus trichocarpa.
001D60 (2015) Charles J. Mason [États-Unis] ; Jesse A. Pfammatter ; Liza M. Holeski ; Kenneth F. RaffaFoliar bacterial communities of trembling aspen in a common garden.
002092 (2014) Kathryn M. Robinson ; Nicolas Delhomme ; Niklas M Hler ; Bastian Schiffthaler ; Jenny Onskog ; Benedicte R. Albrectsen ; P R K. Ingvarsson ; Torgeir R. Hvidsten ; Stefan Jansson ; Nathaniel R. Street [Suède]Populus tremula (European aspen) shows no evidence of sexual dimorphism.
002159 (2014) José Tomás Matus [Chili] ; Felipe Aquea [Chili] ; Carmen Espinoza [Chili] ; Andrea Vega [Chili] ; Erika Cavallini [Italie] ; Silvia Dal Santo [Italie] ; Paola Ca N [Chili] ; Amparo Rodríguez-Hoces De La Guardia [Chili] ; Jennifer Serrano [Chili] ; Giovanni Battista Tornielli [Italie] ; Patricio Arce-Johnson [Chili]Inspection of the grapevine BURP superfamily highlights an expansion of RD22 genes with distinctive expression features in berry development and ABA-mediated stress responses.
002233 (2014) Shengji Wang [République populaire de Chine] ; Jiying Wang ; Wenjing Yao ; Boru Zhou ; Renhua Li ; Tingbo JiangExpression patterns of WRKY genes in di-haploid Populus simonii × P. nigra in response to salinity stress revealed by quantitative real-time PCR and RNA sequencing.
002242 (2014) Lijun Liu ; Victor Missirian ; Matthew Zinkgraf ; Andrew Groover ; Vladimir FilkovEvaluation of experimental design and computational parameter choices affecting analyses of ChIP-seq and RNA-seq data in undomesticated poplar trees.
002307 (2014) Peng Xu ; Yimeng Kong ; Dongliang Song ; Cheng Huang ; Xuan Li ; Laigeng Li [République populaire de Chine]Conservation and functional influence of alternative splicing in wood formation of Populus and Eucalyptus.
002323 (2014) Haiying Liang [États-Unis] ; Margaret Staton [États-Unis] ; Yi Xu [États-Unis] ; Tao Xu [États-Unis] ; Jared Leboldus [États-Unis]Comparative expression analysis of resistant and susceptible Populus clones inoculated with Septoria musiva.
002430 (2013) Sheng Zhu [République populaire de Chine] ; Yong-Mei Dai ; Xin-Ye Zhang ; Jian-Ren Ye ; Ming-Xiu Wang ; Min-Ren HuangUntangling the transcriptome from fungus-infected plant tissues.
002463 (2013) Hua Bao [Canada] ; Eryang Li ; Shawn D. Mansfield ; Quentin C B. Cronk ; Yousry A. El-Kassaby ; Carl J. DouglasThe developing xylem transcriptome and genome-wide analysis of alternative splicing in Populus trichocarpa (black cottonwood) populations.
002489 (2013) Yuepeng Song [République populaire de Chine] ; Kaifeng Ma ; Dong Ci ; Zhiyi Zhang ; Deqiang ZhangSexual dimorphism floral microRNA profiling and target gene expression in andromonoecious poplar (Populus tomentosa).
002642 (2013) Yuanyuan Ren [République populaire de Chine] ; Lei Chen ; Yiyun Zhang ; Xiangyang Kang ; Zhiyi Zhang ; Yanwei WangIdentification and characterization of salt-responsive microRNAs in Populus tomentosa by high-throughput sequencing.
002643 (2013) Liang Xu [République populaire de Chine] ; Yan Wang ; Yuanyuan Xu ; Liangju Wang ; Lulu Zhai ; Xianwen Zhu ; Yiqin Gong ; Shan Ye ; Liwang LiuIdentification and characterization of novel and conserved microRNAs in radish (Raphanus sativus L.) using high-throughput sequencing.
002661 (2013) Bosheng Li [République populaire de Chine] ; Hui Duan ; Jigang Li ; Xing Wang Deng ; Weilun Yin ; Xinli XiaGlobal identification of miRNAs and targets in Populus euphratica under salt stress.
002A17 (2012) Abhijit A. Karve [États-Unis] ; Sara S. Jawdy ; Lee E. Gunter ; Sara M. Allen ; Xiaohan Yang ; Gerald A. Tuskan ; Stan D. Wullschleger ; David J. WestonInitial characterization of shade avoidance response suggests functional diversity between Populus phytochrome B genes.
002A36 (2012) Yuanyuan Ren [République populaire de Chine] ; Lei Chen ; Yiyun Zhang ; Xiangyang Kang ; Zhiyi Zhang ; Yanwei WangIdentification of novel and conserved Populus tomentosa microRNA as components of a response to water stress.
002A56 (2012) Lei Chen [République populaire de Chine] ; Yuanyuan Ren ; Yiyun Zhang ; Jichen Xu ; Zhiyi Zhang ; Yanwei WangGenome-wide profiling of novel and conserved Populus microRNAs involved in pathogen stress response by deep sequencing.
003669 (2009) Jingyu Zhang [République populaire de Chine] ; Yunyuan Xu ; Qing Huan ; Kang ChongDeep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response.
003676 (2009) Dandan Song [République populaire de Chine] ; Yang Yang ; Bin Yu ; Binglian Zheng ; Zhidong Deng ; Bao-Liang Lu ; Xuemei Chen ; Tao JiangComputational prediction of novel non-coding RNAs in Arabidopsis thaliana.
003717 (2009) Shanfa Lu [États-Unis] ; Ying-Hsuan Sun ; Vincent L. ChiangAdenylation of plant miRNAs.
003942 (2008) Kristina Ulrich [Allemagne] ; Andreas Ulrich ; Dietrich EwaldDiversity of endophytic bacterial communities in poplar grown under field conditions.
003B37 (2007) Abdelali Barakat [États-Unis] ; Kerr Wall ; Jim Leebens-Mack ; Yunjiao J. Wang ; John E. Carlson ; Claude W. DepamphilisLarge-scale identification of microRNAs from a basal eudicot (Eschscholzia californica) and conservation in flowering plants.
003C21 (2007) Abdelali Barakat [États-Unis] ; Phillip K. Wall ; Scott Diloreto ; Claude W. Depamphilis ; John E. CarlsonConservation and divergence of microRNAs in Populus.

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